nndt.datasets package#

Submodules#

nndt.datasets.acdc module#

class nndt.datasets.acdc.ACDC(name='ACDC_5', to_path=None)[source]#

Bases: nndt.datasets.dataset.Dataset

ACDC dataset includes 100 models of the left and right ventricles of the human heart. There are healthy patients and four types of pathologies.

NNDT DOES NOT DOWNLOAD THE ORIGINAL DATA! We preprocess some subsets of models to create toy examples for testing NNDT capabilities.

Available out-of-the-box model subsets:

  • ACDC_5 includes five models from ACDC. One healthy example and four pathologies.

Source: https://www.creatis.insa-lyon.fr/Challenge/acdc/

nndt.datasets.dataset module#

class nndt.datasets.dataset.Dataset(name=None, to_path=None)[source]#

Bases: object

dataset_list()[source]#

Get available subsets of the models

Returns

list of the available datasets for the download

load() → str[source]#

Load the dataset and return the path to its location.

Returns

path to dataset location

nndt.datasets.miccai2015 module#

class nndt.datasets.miccai2015.MICCAI2015(name='left_adrenal_gland_10', to_path=None)[source]#

Bases: nndt.datasets.dataset.Dataset

MICCAI2015 includes 50 CT scans and ground truth segmentation of 13 abdominal organs.

NNDT DOES NOT DOWNLOAD THE ORIGINAL DATA! We preprocess some subsets of models to create toy examples for testing NNDT capabilities.

Available out-of-the-box model subsets:

  • left_adrenal_gland_10 includes 10 models of the adrenal glands

  • stomach_10 includes 10 models of the stomach.

Source: https://www.synapse.org/#!Synapse:syn3193805/wiki/217789 DOI: https://doi.org/10.7303/syn3193805

nndt.datasets.utils module#

Module contents#